PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69523.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family NF-X1
Protein Properties Length: 1063aa    MW: 115157 Da    PI: 8.0999
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69523.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X120.69.3e-07294311118
    zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                 CG+H+C+k CH G C+pC
  EPS69523.1 294 CGRHSCKKACHIGSCDPC 311
                 ****************** PP

2zf-NF-X117.11.2e-05358375118
    zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                 CG+H C +lCH+GpC++C
  EPS69523.1 358 CGNHFCLALCHPGPCGKC 375
                 ****************** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578501.94E-5117186No hitNo description
PROSITE profilePS500168.867124185IPR019787Zinc finger, PHD-finger
PROSITE profilePS500899.303127183IPR001841Zinc finger, RING-type
PROSITE patternPS013590127182IPR019786Zinc finger, PHD-type, conserved site
SMARTSM004380.27239257IPR000967Zinc finger, NF-X1-type
PfamPF014229.2241256IPR000967Zinc finger, NF-X1-type
CDDcd060087.72E-11284332No hitNo description
SMARTSM004386.5E-4294313IPR000967Zinc finger, NF-X1-type
PfamPF014227.2E-4294311IPR000967Zinc finger, NF-X1-type
CDDcd060081.24E-7348390No hitNo description
SMARTSM004387.3E-4358377IPR000967Zinc finger, NF-X1-type
PfamPF014221.5E-4358375IPR000967Zinc finger, NF-X1-type
CDDcd060088.63E-12406452No hitNo description
SMARTSM004381.6416435IPR000967Zinc finger, NF-X1-type
PfamPF014220.071416433IPR000967Zinc finger, NF-X1-type
SMARTSM0043851474508IPR000967Zinc finger, NF-X1-type
PfamPF0142216474485IPR000967Zinc finger, NF-X1-type
CDDcd060082.72E-8502554No hitNo description
SMARTSM004387.6E-4512531IPR000967Zinc finger, NF-X1-type
PfamPF014223.6E-4512529IPR000967Zinc finger, NF-X1-type
SMARTSM004380.21569587IPR000967Zinc finger, NF-X1-type
PfamPF01422160569586IPR000967Zinc finger, NF-X1-type
SMARTSM004380.63622651IPR000967Zinc finger, NF-X1-type
PfamPF014220.086622637IPR000967Zinc finger, NF-X1-type
CDDcd060089.87E-5649698No hitNo description
SMARTSM004380.083660681IPR000967Zinc finger, NF-X1-type
Gene3DG3DSA:3.30.70.3303.2E-4909953IPR012677Nucleotide-binding alpha-beta plait domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0000166Molecular Functionnucleotide binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 1063 aa     Download sequence    Send to blast
MNSTAPNRQQ KDNSNQRSRK NNPRNNRQEW VPRASLPVLA AQLPPIGVES SFQNEDGSGG  60
EAVDRPSMHS SGPNHALPRR SQTRSSVKLE EKGNYNRRIP AKVLNGVSIP QLVQEIQDKL  120
LKGAVECMIC YDMVQRSSPI WSCSSCYSIF HLSCTKKWAR APTSVDLLVE KNQGSNWRCP  180
GCQNVQLISA KEIRYVCFCG KRPDPPSDLY LTPHSCGEPC GKALERELPA DGMTSEYMCP  240
HLCVLQCHPG PCPPCTAFAP PRSCPCGKKV IATRCSDRRS ALTCGQICDR ILDCGRHSCK  300
KACHIGSCDP CEILIDASCF CKKNIETVPC GDIPVKGEIE SESGVFSCSS ICQKKLDCGN  360
HFCLALCHPG PCGKCDLSPS MIKSCCCGKT PLKEDRKSCL DPIPTCSQNC GKILPCGFHC  420
CSEKCHSGDC PPCHVLVTQK CRCGSASRTV ECFRTVSETE KFTCDKPCGQ KKSCGRHRCS  480
DRCCPLSHPS NSSSLDWDPH LCSMPCEKKL RCGQHSCRSL CHSGHCPPCM ETIFTDLSCA  540
CGRTSIPPPL PCGTAPPSCQ LPCLLPQPCG HPSSHSCHFG NCPTCSVPIS KECVGGHVVL  600
RNIPCGSKDI RCNQSCRKTR QCGLHSCTRA CHPPPCDSSQ ETSSSRSSCG QTCGAPRREC  660
RHSCTSLCHP STPCPDERCE IPVTITCSCG RMTASVPCDI GGSSNGYNGD TIREASIIHK  720
LPVSLQPMEG NNGQRMPLSQ RKLMCDDECL KMERKKVLAD AFGVSNPNLD ALHFGDDASS  780
SLSEALSDLL KRDTKWVLSV EERCKYLLLG RSRGITTSAV KVHVFCVMSK EKRDAVRLIV  840
ERWKLSVSSA GWEPKRFLVV HVAQKSKAPS RVLLGTKSPN PTATLQPPAF DPSVDMDPRL  900
VVALFDMPRD SDVSALVLRF GGECELVWLN DKNALAVFSD PARASTAMRR LDQGSVYHGA  960
AAFVPQKSGP PPSSVAGASS AAWGGSSTVA ASASAPSKGW KTAISKSGLE EWSSNRWSTL  1020
SQAGGGISSE RRAADPSSDE SGNNPPILSR DNTVVDDWEK AYE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083338.10.0PREDICTED: NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLS8E1J10.0S8E1J1_9LAMI; Uncharacterized protein
STRINGVIT_17s0000g01920.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA93132428
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]